Occurrence record: PERTH 8449511

Preserved specimen of Arabidopsis thaliana (L.) Heynh. | Thale Cress recorded on 2008-10-04

API

Dataset

Data partner	Australia's Virtual Herbarium
Data resource	Western Australian Herbarium (PERTH) AVH data
Institution code	Western Australia, Department of Biodiversity, Conservation and Attractions Supplied institution code "PERTH"
Collection	Western Australian Herbarium Supplied collection code "PERTH"
Catalog number	PERTH 8449511
Occurrence ID	8449511
Record type	Preserved specimen Supplied basis "PreservedSpecimen"
Collector	1. Keighery, G.J. 2. Keighery, B.J. Supplied as "Keighery, G.J.; Keighery, B.J."
Record number	1530
Associated Occurrence Status	Representative record
Associated occurrences	This record has 1 inferred associated occurrences For more information see Inferred associated occurrence details
License	CC0 Supplied as CC0 International
Rights holder	Department of Biodiversity, Conservation and Attractions
Institution ID	https://www.gbif.org/grscicoll/institution/d129a8d1-2339-4a47-aa19-a8e0a078082a
Field Number	1530
Language	en
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Owner institution code	PERTH
Collection	https://www.gbif.org/grscicoll/collection/4c63d5f6-b20b-49e5-8006-e2af210eab0e
Associated records	REPRESENTATIVE
Dataset / Survey name	[PERTH AVH data]
Organism remarks	Rosetted annual herb. Flowers white, in flower and fruit.
Occurrence remarks	Gentle slope, calcrete. Mossy black sand.
Access rights	https://florabase.dpaw.wa.gov.au/help/copyright
Identification verification status	verified

Event

Dataset / Survey name	PERTH AVH data
Field Number	1530
Occurrence date	2008-10-04
Verbatim event date	4 Oct 2008
Date precision	DAY

Taxonomy

Scientific name	Arabidopsis thaliana Supplied scientific name "Arabidopsis thaliana (L.) Heynh."
Identified to rank	species
Common name	Thale Cress
Kingdom	Plantae
Phylum	Charophyta
Class	Equisetopsida
Order	Brassicales
Family	Brassicaceae
Genus	Arabidopsis
Species	Arabidopsis thaliana
Name match metric	exactMatch
Scientific name authorship	(L.) Heynh.
Name parse type	SCIENTIFIC
Nomenclatural code	ICBN
Taxonomic status	accepted

Geospatial

Country	Australia
State or Territory	Western Australia
Locality	Eastern side of Lake Preston, Yalgorup National Park
Habitat	Supplied as "Gentle slope, calcrete. Mossy black sand. Melaleuca cuticularis low forest to woodland."
Latitude	-33.021667 Supplied as: "-33.02166667"
Longitude	115.685 Supplied as: "115.68500000"
Datum	EPSG:4326 Supplied datum: "GDA94"
Verbatim locality	Eastern side of Lake Preston, Yalgorup National Park
Coordinate precision	Unknown
Coordinate uncertainty (in metres)	10000.0
Location according to	collector
Terrestrial	true
Biome	TERRESTRIAL
Marine	false
Country Code	AU

Additional properties

verbatim identification	Arabidopsis thaliana (L.) Heynh.

User flagged issues

Data quality tests

Test name	Result
Coordinate rounded	Warning
Show/Hide 93 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate uncertainty meters invalid	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identification date before occurrence date	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date invalid	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 6 missing properties
Missing georeferenced by	Missing
Missing georeference protocol	Missing
Missing georeference sources	Missing
Missing georeference verification status	Missing
Missing georeference date	Missing
Missing taxon rank	Missing
Show/Hide 24 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Individual count invalid	Unchecked (lack of data)
Individual count conflicts with occurrence status	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Outlier information

This record has been detected as an outlier using the Reverse Jackknife algorithm for the following layers:

Precipitation - seasonality (Bio15) - CSIRO Ecosystem Sciences
Notes: Data derived using ANUCLIM v6 (beta) with the new set of climate surfaces (centred on 1990), by Dr. Kristen Williams.
Scale: 0.01 degree (~1km)
Precipitation - driest quarter (Bio17) - CSIRO Ecosystem Sciences
Notes: Data derived using ANUCLIM v6 (beta) with the new set of climate surfaces (centred on 1990), by Dr. Kristen Williams.
Scale: 0.01 degree (~1km)

More information on the data quality work being undertaken by the Atlas is available here:

Inferred associated occurrence details

This record has been identified as the representative occurrence in a group of associated occurrences. This mean other records have been detected that seem to relate to this record and this particular record has the most detailed information on the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	7b512ea4-0fbd-4f50-88a9-bbdc1b21a1c9
Data Resource	Western Australian Herbarium (PERTH) AVH data
Raw Scientific Name	Arabidopsis thaliana (L.) Heynh.
Coordinates	-33.021667,115.685
Related records
Record UUID	8d45daf2-b50e-4778-adc9-29f086af26d9
Data Resource	Centre for Australian National Biodiversity Research (CANB) AVH data
Raw Scientific Name	Arabidopsis thaliana (L.) Heynh.
Coordinates	-33.021667,115.685

Additional political boundaries information

Area Management
CAPAD 2016 Terrestrial	Yalgorup
CAPAD 2020 Terrestrial	Yalgorup
Directory of Important Wetlands	Yalgorup Lakes System
NRM Regions 2010	South West
NRM Regions 2017	Peel-Harvey Region
RAMSAR wetland regions	Peel-Yalgorup System
Area management
National Landcare Program Management Units 2018	Peel-Harvey Region
Biodiversity
IBRA 6 Regions	Swan Coastal Plain
IBRA 7 Regions	Swan Coastal Plain
IBRA 7 Subregions	Perth
Hydrology
Drainage Divisions Level 1	South West Coast
Drainage Divisions Level 2	MURRAY RIVER (WA)
Land Management
Western Australian Biodiversity Science Research Priority Regions	South-West
Marine
States including coastal waters	Western Australia (including Coastal Waters)
Political
ASGS Australian States and Territories	Western Australia
Australian States and Territories	Western Australia
Local Government Areas 2011	Harvey (S)
Local Government Areas 2012 deprecated	Harvey
Local Government Areas PSMA 2018	SHIRE OF HARVEY
PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016)	3
PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016)	589
PSMA ABS Greater Capital City Statistical Areas (2016)	REST OF WA
PSMA ABS SA2 Statistical Areas (2016)	HARVEY
PSMA ABS SA3 Statistical Areas (2016)	BUNBURY
PSMA ABS SA4 Statistical Areas (2016)	BUNBURY
PSMA Commonwealth Electoral Boundaries (2018)	FORREST
PSMA Indigenous Areas (2016)	HARVEY AND SURROUNDS
PSMA Indigenous Locations (2016)	HARVEY AND SURROUNDS
PSMA Indigenous Regions (2016)	SOUTH-WESTERN WA
PSMA Remoteness Areas (2016)	Inner Regional Australia
PSMA State Electoral Boundaries (2018)	SOUTH WEST REGION
PSMA States (2016)	WESTERN AUSTRALIA
World Country Boundaries	Australia
Vegetation
Australia's Indigenous forest estate (2013) v2.0	Non-Indigenous, Non forest
Forests of Australia (2013) v2.0	Non Forest
Forests of Australia 2018B	Non forest
NVIS 4.1 Major Vegetation Groups	Cleared, non-native vegetation, buildings
NVIS 4.1 Major Vegetation Subgroups	Cleared, non-native vegetation, buildings
Tenure of Australia's forests (2013) v2.0	Nature Conservation Reserve
Vegetation types - native	Inland aquatic - freshwater, salt lakes and lagoons
Vegetation types - present	cleared, non-native vegetation, buildings

Environmental sampling for this location

Climate
Precipitation - annual (Bio12)	848.0 mm
Precipitation - coldest quarter (Bio19)	434.0 mm
Precipitation - driest period (Bio14)	2.0 mm
Precipitation - driest quarter (Bio17)	41.0 mm
Precipitation - seasonality (Bio15)	82.0 mm
Precipitation - warmest quarter (Bio18)	45.0 mm
Precipitation - wettest period (Bio13)	42.0 mm
Precipitation - wettest quarter (Bio16)	464.0 mm
Radiation - annual mean (Bio20)	17.8 MJ/m2/day
Radiation - seasonality (Bio23)	40.0
Radiation - warmest quarter (Bio26)	24.5 MJ/m2/day
Temperature - annual mean (Bio01)	17.6 degrees C
Temperature - annual range (Bio07)	21.3 degrees C
Temperature - coldest period min (Bio06)	8.7 degrees C
Temperature - coldest quarter mean (Bio11)	13.3 degrees C
Temperature - diurnal range mean (Bio02)	10.3 degrees C
Temperature - driest quarter mean (Bio09)	22.5 degrees C
Temperature - isothermality (Bio03)	0.49 %
Temperature - seasonality (Bio04)	1.28
Temperature - warmest period max (Bio05)	30.0 degrees C
Temperature - warmest quarter (Bio10)	22.6 degrees C
Temperature - wettest quarter mean (Bio08)	13.9 degrees C
WorldClim 2.1: Temperature - annual mean	17.583334 °C
WorldClim: Temperature - isothermality	51.0 %
Substrate
Moisture Index - annual mean (Bio28)	0.57
Moisture Index - highest quarter mean (Bio32)	1.0
Elevation	8.0 m

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Arabidopsis thaliana (L.) Heynh.	Arabidopsis thaliana
	Match type		exactMatch
	Phylum id		https://id.biodiversity.org.au/taxon/apni/51744351
	Family id		https://id.biodiversity.org.au/taxon/apni/51612687
	Taxon concept ID		https://id.biodiversity.org.au/node/apni/2913869
	Order		Brassicales
	Taxon rank id		7000
	Species id		https://id.biodiversity.org.au/node/apni/2913869
	Genus	Arabidopsis	Arabidopsis
	Left		578696
	Scientific name authorship	(L.) Heynh.	(L.) Heynh.
	Taxon rank		species
	Genus id		https://id.biodiversity.org.au/node/apni/2891613
	Name type		SCIENTIFIC
	Vernacular name		Thale Cress
	Nomenclatural code	ICBN
	Order id		https://id.biodiversity.org.au/taxon/apni/51612688
	Taxonomic status	accepted
	Right		578696
	Kingdom		Plantae
	Specific epithet	thaliana
	Class id		https://id.biodiversity.org.au/taxon/apni/51744350
	Phylum		Charophyta
	Class		Equisetopsida
	Species		Arabidopsis thaliana
	Family	Brassicaceae	Brassicaceae
	Kingdom id		https://id.biodiversity.org.au/taxon/apni/51744352
Event	Verbatim event date	4 Oct 2008
	Year		2008
	Dataset / Survey name	[PERTH AVH data]
	Month		10
	Date precision		DAY
	Day		4
	Event date	2008-10-04	2008-10-04
Identification	Identification verification status	verified
Occurrence	Associated occurrences		8d45daf2-b50e-4778-adc9-29f086af26d9
	Rights holder		Department of Biodiversity, Conservation and Attractions
	Institution ID	https://www.gbif.org/grscicoll/institution/d129a8d1-2339-4a47-aa19-a8e0a078082a
	Duplication status		R
	Field number	1530
	Language	en
	Type		PhysicalObject
	Catalog number	PERTH 8449511
	Occurrence status	present	PRESENT
	Basis of record	PreservedSpecimen	PRESERVED_SPECIMEN
	Modified	2013-09-02 05:15:00+00	2013-09-02T05:15Z
	Record number	1530
	Outlier for layers		[el882, el889]
	Collection code	PERTH
	Occurrence ID	8449511
	Owner institution code	PERTH
	Collection ID	https://www.gbif.org/grscicoll/collection/4c63d5f6-b20b-49e5-8006-e2af210eab0e
	Duplicate status		REPRESENTATIVE
	Institution code	PERTH
	Dataset / Survey name	[PERTH AVH data]
	Recorded by	Keighery, G.J.; Keighery, B.J.	[Keighery, G.J., Keighery, B.J.]
	Organism remarks	Rosetted annual herb. Flowers white, in flower and fruit.
	Occurrence remarks	Gentle slope, calcrete. Mossy black sand.
	Access rights	https://florabase.dpaw.wa.gov.au/help/copyright
Attribution	Data resource		Western Australian Herbarium (PERTH) AVH data
	Collection		Western Australian Herbarium
	License	CC0 International	CC0
	Data provider uid		dp36
	Provenance		Published dataset
	Data Resource ID	dr15863	dr15863
	Institution ID		in33
	Data partner		Australia's Virtual Herbarium
	Institution		Western Australia, Department of Biodiversity, Conservation and Attractions
	Data hub uid	[dh9]
	Collection ID		co75
Location	Country	Australia	Australia
	Habitat	Gentle slope, calcrete. Mossy black sand. Melaleuca cuticularis low forest to woodland.
	Decimal latitude	-33.02166667	-33.021667
	Location according to	collector
	Terrestrial	true	true
	Locality	Eastern side of Lake Preston, Yalgorup National Park	Eastern side of Lake Preston, Yalgorup National Park
	Decimal longitude	115.68500000	115.685
	State province	Western Australia	Western Australia
	Verbatim locality	Eastern side of Lake Preston, Yalgorup National Park
	Biome		TERRESTRIAL
	Coordinate uncertainty in meters	10000.0	10000.0
	Lga	Harvey (S)
	Marine	false	false
	Country code		AU
	Geodetic datum	GDA94	EPSG:4326

AVH

The Australasian Virtual Herbarium